Accessing Multiseq

MultiSeq is part of the standard VMD release. You can download VMD from http://www.ks.uiuc.edu/Research/vmd/. To begin MultiSeq, launch VMD and:

1. In the VMD main window, click on the Extensions Menu.
2. In Extensions, select Analysis $\rightarrow$ MultiSeq.

(alternatively, you can type `multiseq' into the VMD terminal window)

The main MultiSeq window (see Fig. 2) will appear (note that the first time you run MultiSeq, you will be prompted to download necessary databases before seeing the main window)

Figure 2: Main MultiSeq Window With No Structures Loaded