pyLM.ipyInterface Namespace Reference

Functions
def	getReactionString
	Write a reaction to a string with the correct units. More...
def	writeTable
	Write an HTML formatted table to a string. More...
def	displayRDMESetup
	Display an RDME initial conditions in a Jupyter Notebook using ipywidgets. More...

Function Documentation

def pyLM.ipyInterface.displayRDMESetup	(		filename,
			continuous_update = True
	)

Display an RDME initial conditions in a Jupyter Notebook using ipywidgets.

Parameters

filename	The name of a LM file encoding an RDME simulation
continuous_update	Whether to update the view continuously or only during; default: True

def pyLM.ipyInterface.getReactionString	(		rct,
			prd,
			rate
	)

Write a reaction to a string with the correct units.

Parameters

rct	Reactants tuple or string
prd	Products tuple or string
rate	The rate constant

Returns

Three strings: 1) Reaction, 2) rate constant, and 3) units of the rate constant

def pyLM.ipyInterface.writeTable	(		columnNames,
			rows
	)

Write an HTML formatted table to a string.

Parameters

columnNames	The name of the columns for the table
rows	A list of tuples each of the same length as columnNames