- a -

• addLacTwoStateSystem() : pySTDLM::StandardReactionSystems
• addMembraneTransporter() : pySTDLM::StandardReactions
• addMichaelisMenten() : pySTDLM::StandardReactions
• addMinDESystem() : pySTDLM::StandardReactionSystems
• addPassiveTransport() : pySTDLM::StandardReactions
• addPTSPathway() : pySTDLM::StandardReactionSystems
• addReversibleMichaelisMenten() : pySTDLM::StandardReactions
• angstrom() : pyLM::units

- b -

• buildDividingEColiCell() : pySTDLM::StandardCells
• buildEColiCell() : pySTDLM::StandardCells
• buildFilamentousEColiCell() : pySTDLM::StandardCells
• buildSphericalEColiCell() : pySTDLM::StandardCells

- c -

• closeLMFile() : pySTDLM::PostProcessing
• cm() : pyLM::units
• createExpressionModel() : pySTDLM::StandardReactions

- d -

• day() : pyLM::units
• displayRDMESetup() : pyLM::ipyInterface
• DistributionComparator() : pySTDLM::Fitting

- g -

• getAvgVarTrace() : pySTDLM::PostProcessing
• getHistogram() : pySTDLM::PostProcessing
• getOccupancyKymograph() : pySTDLM::PostProcessing
• getPhaseSpace() : pySTDLM::PostProcessing
• getRate() : pySTDLM::SBMLReader
• getReactionString() : pyLM::ipyInterface
• getSpecieTrace() : pySTDLM::PostProcessing
• getTimesteps() : pySTDLM::PostProcessing

- h -

• hr() : pyLM::units

- i -

• importSBMLModel() : pySTDLM::SBMLReader
• importSBMLModelL3V1() : pySTDLM::SBMLReader

- m -

• micron() : pyLM::units
• microsecond() : pyLM::units
• minute() : pyLM::units
• mm() : pyLM::units
• ms() : pyLM::units

- n -

• nm() : pyLM::units
• ns() : pyLM::units

- o -

• openLMFile() : pySTDLM::PostProcessing

- p -

• packFastGrowingEcoli() : pySTDLM::StandardCells
• packSlowGrowingEcoli() : pySTDLM::StandardCells
• plotAvgVar() : pySTDLM::PostProcessing
• plotAvgVarFromFile() : pySTDLM::PostProcessing
• plotCMEDynamicReactionNetwork() : pySTDLM::NetworkVisualization
• plotCMEReactionNetwork() : pySTDLM::NetworkVisualization
• plotOccupancyKymograph() : pySTDLM::PostProcessing
• plotPhaseSpace() : pySTDLM::PostProcessing
• plotRDMEReactionNetwork() : pySTDLM::NetworkVisualization
• plotReactionNetwork() : pySTDLM::NetworkVisualization
• plotTrace() : pySTDLM::PostProcessing
• plotTraceFromFile() : pySTDLM::PostProcessing

- r -

• readSBMLtoCME() : pySTDLM::SBMLReader
• readSBMLtoRDME() : pySTDLM::SBMLReader
• readSBMLtoRegion() : pySTDLM::SBMLReader

- s -

• second() : pyLM::units
• setLMLogConsole() : pyLM::LMLogger
• setLMLogFile() : pyLM::LMLogger
• setLMLoggerLevel() : pyLM::LMLogger
• showAvgVar() : pySTDLM::PostProcessing
• showAvgVarFromFile() : pySTDLM::PostProcessing
• showOccupancyKymograph() : pySTDLM::PostProcessing
• showTrace() : pySTDLM::PostProcessing
• showTraceFromFile() : pySTDLM::PostProcessing

- t -

• tqdm() : pyLM::CME , pyLM::RDME

- w -

• writeTable() : pyLM::ipyInterface